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Advanced Neuro MR Techniques and Applications

Book Companion

Advanced Neuro MR Techniques and Applications

Edition 1

Welcome to companion site of Advances in Magnetic Resonance Technology and Applications,  1st Edition Part of the Series Advances in Magnetic Resonance Imaging Technology and Applications.

Edited by: In-Young Choi and Peter Jezzard

About Advanced Neuro MR Techniques and Applications: Advanced Neuro MR Techniques and Applications gives detailed knowledge of emerging neuro MR techniques and their specific clinical and neuroscience applications, showing their pros and cons over conventional and currently available advanced techniques. It identifies the best available data acquisition, processing, reconstruction, and analysis strategies and methods that can be utilized in clinical and neuroscience research.

The following website provides resources for two chapters. Those are:

Chapter Two: Advanced Reconstruction Methods for Fast MRI by Florian Knoll opens in new tab/window Brain MRI data from a T2-weighted Turbo-Spin-Echo (TSE) sequence for the didactic examples in the image reconstruction chapter of the textbook Advanced Neuro MR Techniques and Applications. A detailed description of the data acquisition is provided in section 2 of the chapter.[Knoll]

Chapter Six: Image Registration by Hui Zhang opens in new tab/window Matlab code and data are provided to recreate Figures 6.1 and 6.2 in the chapter, demonstrating image fusion and spatial normalization procedures. More details can be found here: https://github.com/garyhuizhang/MedicalImageRegistrationDemo opens in new tab/window

Chapter Thirteen: Contrast Agent-Based Perfusion MRI Methods by Laura C. Bell, Sudarshan Ragunathan, and Anahita Fathi Kazerooni This Jupyter notebook provides code and worked examples for readers of Chapter 13 to better understand the processing steps involved in analyzing DSC and DCE data. Please see Chapter 13 for details of the theory

Chapter Twenty Five: Chemical Exchange Saturation Transfer (CEST) MRI as a Tunable Relaxation Phenomenon by Moritz Zaiss, Felix Gang, and Kai Herz

  1. Analytical solutions of the Bloch-McConnell equations for 3 exchanging pools: water, CEST and a semisolid MT pool. Original Code on https://github.com/cest-sources/Z-cw/ opens in new tab/window More details on https://cest-sources.org/doku.php?id=analytic_z-spectra-cw-3pool opens in new tab/window

  2. A repository of CEST presaturation blocks in the open-source Pulseq-CEST format with integrated numerical Bloch simulation to simulate CEST preparation. Original Code on https://pulseq-cest.github.io/ opens in new tab/window

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