Guide for Authors
The International Journal of Plant Chemistry, Plant Biochemistry and Molecular Biology.
An Official Journal of the Phytochemical Society of Europe and the Phytochemical Society of North America.
INTRODUCTION
BEFORE YOU BEGIN
Ethics in Publishing -
Conflict of interest -
Submission
declaration -
Copyright -
Retained author rights
-
Role of the funding source -
Funding body agreements and
policies -
Language and language services -
Submission
-
Referees -
Additional Information
PREPARATION
Use of wordprocessing software -
Article Structure
-
Subdivision - numbered sections -
Introduction
-
Material and methods -
Theory/calculation -
Results -
Discussion -
Experimental
-
Conclusions -
Essential title page information
-
Abstract -
Graphical abstract -
Keywords
-
Abbreviations -
Acknowledgements -
Nomenclature
and Units -
-
-
-
-
Accession numbers -
Electronic
artwork -
Color Artwork -
Figure captions
-
Tables -
References -
Citation
in text -
Reference style -
Journal Abbreviations
Source -
Supplementary material -
Submission
checklist -
Additional Information
AFTER
ACCEPTANCE
Use of the Digital Object Identifier -
Proofs
-
Offprints
AUTHOR INQUIRIES
INTRODUCTION
Phytochemistry invites research articles on all aspects of pure and applied plant
chemistry, plant biochemistry, plant molecular biology and chemical ecology. The Journal is currently divided up into the following sections:
Editorial
Comment, Molecules of Interest, Review Articles, Structural Elucidation and Full Papers.
Editorial Comment will be an occasional
series where Regional Editors, Board Members or other scientists will be invited to comment on pythochemistry topics of global interest
and debate.
Molecules of Interest will consist of invited short reviews (3-4) printed pages of individual compounds or macromolecules
of plant, fungal or algal origin. These can be novel compounds or newly discovered properties of familiar compounds. Please contact one
of the Regional Editors if you wish to prepare a Molecules of Interest paper.
Review Articles are published at regular intervals,
ranging in scope from primary metabolism and regulation of plant growth, through plant enzymology to natural product chemistry and the
biological activity of plant products. They deal with significant new areas of research and are intended to command the interest of the
general reader. Authors should consult their Regional Editors with an outline of their proposed Review before preparing such articles.
Published Reviews include a biography and picture of each author.
Structure Elucidation papers, accepted as full papers in
the Chemistry section, should include either a substantial description of several new compounds without any conclusion as to their significance,
or a description of the study of new compounds with expected structures incorporating conclusions. These papers are succinct (6-8 pages
of double-spaced manuscript) and should follow the general style of Full Papers although the Introduction, Results and Discussion may
be combined as a single narrative. Brief abstracts must be included, containing significant facts derived from the work. Reports of known
compounds, however rare, from new plant sources will not generally be accepted unless they have real chemotaxonomic or other biological
significance. Authors are specifically discouraged from submitting papers as fragmented analyses of particular plant constituents.
Full
Papers: Full journal articles will be drawn from areas described in the Aims and Scope:
Bioactive Products
Chemotaxonomy
Chemistry
Ecological Biochemistry
Metabolism
Molecular Genetics & Genomics
Protein Biochemistry & Proteomics
Update in Bioinformatics
They are comprehensive papers, typically 6-8 printed pages in length (24-28 pages of double-spaced manuscript).
Papers on plant chemistry must be substantial and contain convincing justification for undertaking the study, as well as having conclusions
(e.g. on the biology, chemotaxonomy, new biosynthetic pathways etc.).
BEFORE YOU BEGIN
Ethics in Publishing
For information on Ethics in Publishing and Ethical guidelines for journal publication
see
http://www.elsevier.com/publishingethics and
http://www.elsevier.com/ethicalguidelines.
Conflict of interest
All authors are requested to disclose any actual or potential conflict of interest
including any financial, personal or other relationships with other people or organizations within three years of beginning the submitted
work that could inappropriately influence, or be perceived to influence, their work. See also
http://www.elsevier.com/conflictsofinterest.
Submission declaration
Submission of an article implies that the work described has not been published previously
(except in the form of an abstract or as part of a published lecture or academic thesis), that it is not under consideration for publication
elsewhere, that its publication is approved by all authors and tacitly or explicitly by the responsible authorities where the work was
carried out, and that, if accepted, it will not be published elsewhere in the same form, in English or in any other language, without
the written consent of the copyright-holder.
Copyright
Upon acceptance
of an article, authors will be asked to complete a 'Journal Publishing Agreement' (for more information on this and copyright see
http://www.elsevier.com/copyright).
Acceptance of the agreement will ensure the widest possible dissemination of information. An e-mail will be sent to the corresponding
author confirming receipt of the manuscript together with a 'Journal Publishing Agreement' form or a link to the online version of this
agreement.
Subscribers may reproduce tables of contents or prepare lists of articles including abstracts for internal circulation
within their institutions. Permission of the Publisher is required for resale or distribution outside the institution and for all other
derivative works, including compilations and translations (please consult
http://www.elsevier.com/permissions). If excerpts
from other copyrighted works are included, the author(s) must obtain written permission from the copyright owners and credit the source(s)
in the article. Elsevier has preprinted forms for use by authors in these cases: please consult
http://www.elsevier.com/permissions.
Retained author rights
As an author you (or your employer or institution) retain certain rights; for details
you are referred to:
http://www.elsevier.com/authorsrights.
Role of the
funding source
You are requested to identify who provided financial support for the conduct of the research and/or preparation
of the article and to briefly describe the role of the sponsor(s), if any, in study design; in the collection, analysis and interpretation
of data; in the writing of the report; and in the decision to submit the paper for publication. If the funding source(s) had no such
involvement then this should be stated. Please see
http://www.elsevier.com/funding.
Funding
body agreements and policies
Elsevier has established agreements and developed policies to allow authors whose articles appear
in journals published by Elsevier, to comply with potential manuscript archiving requirements as specified as conditions of their grant
awards. To learn more about existing agreements and policies please visit
http://www.elsevier.com/fundingbodies.
Language and language services
Please write your text in good English (American or British usage is accepted,
but not a mixture of these). Authors who require information about language editing and copyediting services pre- and post-submission
please visit
http://www.elsevier.com/languagepolishing or our customer support site at
http://epsupport.elsevier.com
for more information. Please note Elsevier neither endorses nor takes responsibility for any products, goods or services offered by outside
vendors through our services or in any advertising. For more information please refer to our Terms & Conditions:
http://www.elsevier.com/termsandconditions.
Submission
Submission to this journal proceeds totally online. Use the following guidelines to prepare
your article. Via the homepage of this journal (
http://www.ees.elsevier.com/phytochem) you will be guided stepwise through
the creation and uploading of the various files. The system automatically converts source files to a single Adobe Acrobat PDF version
of the article, which is used in the peer-review process. Please note that even though manuscript source files are converted to PDF at
submission for the review process, these source files are needed for further processing after acceptance. All correspondence, including
notification of the Editor's decision and requests for revision, takes place by e-mail and via the author's homepage, removing the need
for a hard-copy paper trail.
Referees
Please submit, with the manuscript,
the names, addresses and e-mail addresses of 3 potential referees. Note that the editor retains the sole right to decide whether or not
the suggested reviewers are used.
Additional Information
Please submit
to the appropriate Regional Editor for your geographical region.
For UK, Africa, The Commonwealth and Rest of the World: Professor
G. P. Bolwell.
For the Americas and East Asia: Professor N. G. Lewis.
For Continental Europe and Russia: Professor D. Strack.
PREPARATION
Use of wordprocessing software
It is important
that the file be saved in the native format of the wordprocessor used. The text should be in single-column format. Keep the layout of
the text as simple as possible. Most formatting codes will be removed and replaced on processing the article. In particular, do not use
the wordprocessor's options to justify text or to hyphenate words. However, do use bold face, italics, subscripts, superscripts etc.
Do not embed "graphically designed" equations or tables, but prepare these using the wordprocessor's facility. When preparing tables,
if you are using a table grid, use only one grid for each individual table and not a grid for each row. If no grid is used, use tabs,
not spaces, to align columns. The electronic text should be prepared in a way very similar to that of conventional manuscripts (see also
the Guide to Publishing with Elsevier:
http://www.elsevier.com/guidepublication). Do not import the figures into the text
file but, instead, indicate their approximate locations directly in the electronic text and on the manuscript. See also the section on
Electronic illustrations.
To avoid unnecessary errors you are strongly advised to use the "spell-check" and "grammar-check" functions
of your wordprocessor.
Article Structure
The content of manuscripts
must
be arranged as follows: (1) a
Graphical Abstract; (2) a
Title Page with authors name(s) and address(es); (3) and
Abstract,
in which contents are briefly stated; (4) a
Keyword Index; (5)
Introduction, and (6) the
Results and
Discussion
(preferably combined). Although each section may be separated by headings, they should form one continuous narrative and only include
details essential to the arguments presented. If a discussion is separately provided, it should not include a repetition of the results,
but only indicate conclusions reached on the basis of them, and those from other referred works; (7)
Conclusions or
Concluding
Remarks; (8) the
Experimental should include brief details of the methods used such that a competent researcher in the
field may be able to repeat the work; (9)
Acknowledgments; (10)
Figures and
Legends, Formulae, Tables and
References.
Subdivision - numbered sections
Divide your article
into clearly defined and numbered sections. Subsections should be numbered 1.1 (then 1.1.1, 1.1.2, ...), 1.2, etc. (the abstract is not
included in section numbering). Use this numbering also for internal cross-referencing: do not just refer to "the text". Any subsection
may be given a brief heading. Each heading should appear on its own separate line.
Introduction
State
the objectives of the work and provide an adequate background, avoiding a detailed literature survey or a summary of the results.
Specific
names (genus, species, authority for the binomial) of all experimental plants must be given at first mention according to the
Index
Kewensis (searchable online at
http://www.ipni.org) or similar authority (The Plant-Book: A Portable Dictionary of
the Vascular Plants, by D.J. Mabberley, 2nd ed., June 1997, Cambridge University Press; ISBN: 0521414210), and preferably be in the form
recommended by the
International Code of Botanical
Nomenclature. Named varieties of cultivars are given, e.g.
Lactuca sativa cv. Grand Rapids. (The official printed
version of the International Code of Botanical Nomenclature has been published as International Code of Botanical Nomenclature {Tokyo
Code}. Regnum Vegetabile 131. Koeltz Scientific Books, Konigstein. ISBN 3-87429-367-X or 1-878762-66-4 or 80-901699-l-0.)
Material and methods
Provide sufficient detail to allow the work to be reproduced. Methods already published
should be indicated by a reference: only relevant modifications should be described.
Theory/calculation
A
Theory section should extend, not repeat, the background to the article already dealt with in the Introduction and lay the foundation
for further work. In contrast, a Calculation section represents a practical development from a theoretical basis.
Results
Results should be clear and concise.
Discussion
This
should explore the significance of the results of the work, not repeat them. A combined Results and Discussion section is often appropriate.
Avoid extensive citations and discussion of published literature.
Experimental
Subsections
on the Experimental Procedures should be italicized and inserted as part of the first line of the text to which they apply.
Phytochemistry
encourages an extensive use of abbreviations (these are listed at the back of the Instructions to Authors, or the reader is referred
to other sources). The Experimental should begin with a subsection entitled General Experimental Procedures. This subsection will typically
contain brief details of instruments used, and identification of sources of specialized chemicals, biochemicals and molecular biology
kits.
The next subsection describes the source(s) and documentation of biological materials used, whether in reference to whole plants
or parts therefrom, crude drugs, or any other plant material from which identifiable chemical substances are obtained for the first time.
Documentation must also include a reference to voucher specimen(s) and voucher number(s) of the plants or other material examined. If
available, authors should quote the name and address of the authority who identified each non-cultivated plant investigated. Specimens
should preferentially be deposited in a major regional herbarium where the collection is maintained by state or private institution and
which permits loan of such materials.
With other microorganisms, the culture collection from which they were either accessed and/or
deposited should be included, together with identification of the strain designation code. The Experimental Procedures employed should
be concise but sufficiently detailed that a qualified researcher will be able to repeat the studies undertaken, and these should emphasize
either truly new procedures or essential modifications of existing procedures. Experimental details normally omitted include: (1) method
of preparation of common chemical and biochemical derivatives, (2) excessive details of separation of compounds, proteins and enzymes,
e.g. preparation of columns, TLC plates, column and fraction size.
Compound characterization: Physical and spectroscopic data for
new compounds must be comprehensive, and follow the order shown below: compound name (and assigned number in text); physical state of
compound (e.g. oil, crystal, liquid, etc.), melting and/or boiling point; optical rotation and/or circular dichroism measurements, if
optically active; UV; IR, 1H NMR; 13C NMR; MS. For all new compounds, either high-resolution mass spectral or elemental analysis data
are required.
Conclusions
The main conclusions of the study may be presented
in a short Conclusions section, which may stand alone or form a subsection of a Discussion or Results and Discussion section.
Essential title page information
-
Title. Concise and informative. Titles are often used
in information-retrieval systems. Avoid abbreviations and formulae where possible.
-
Author names and affiliations. Where
the family name may be ambiguous (e.g., a double name), please indicate this clearly. Present the authors' affiliation addresses (where
the actual work was done) below the names. Indicate all affiliations with a lower-case superscript letter immediately after the author's
name and in front of the appropriate address. Provide the full postal address of each affiliation, including the country name, and, if
available, the e-mail address of each author.
-
Corresponding author. Clearly indicate who will handle correspondence
at all stages of refereeing and publication, also post-publication. Ensure that telephone and fax numbers (with country and area code)
are provided in addition to the e-mail address and the complete postal address.
-
Present/permanent address. If an
author has moved since the work described in the article was done, or was visiting at the time, a "Present address" (or "Permanent address")
may be indicated as a footnote to that author's name. The address at which the author actually did the work must be retained as the main,
affiliation address. Superscript Arabic numerals are used for such footnotes.
Abstract
A
concise and factual abstract is required. The abstract should state briefly the purpose of the research, the principal results and major
conclusions. An abstract is often presented separately from the article, so it must be able to stand alone. For this reason, References
should be avoided, but if essential, then cite the author(s) and year(s). Also, non-standard or uncommon abbreviations should be avoided,
but if essential they must be defined at their first mention in the abstract itself.
Graphical
abstract
Please provide, when submitting your article, a graphical abstract. This comprises the title, authors and affiliations,
identical to the article itself, a summary of about 25 words, and a pictogram: one figure representative of the work described. Maximum
final dimensions of the pictogram are 5 x 5 cm: bear in mind readability after reduction, especially if using one of the figures from
the article itself. Graphical abstracts will be collated to provide a contents list for rapid scanning.
Keywords
Authors must give 3-10 keywords or phrases, which identify the most important subjects covered
by the paper. They should be placed at the beginning of the manuscript in the following order: name of plant species examined (Latin
binomial); plant family; common epithet (where applicable); type of investigation; class of compound; protein or gene; name of compound(s);
protein(s) and gene(s).
Abbreviations
About, approximately: ca.
Anhydrous:
dry (not anhyd.)
Aqueous: aq.
Circular dichroism: CD
Concentrated (or mineral acids): conc.
Concentrations: ppm (never ppb!), μM, mM, M, %, mol
Dry weight: dry wt; fresh weight: fr. wt
Electricity: V, mA, eV
Force due to gravity (centrifugation):
g; rpm (revolutions/min)
Gas chromatography: GC
Gas chromatography-mass spectrometry: GC-MS
trimethylsilyl derivative:
TMSi (TMS cannot be used as this refers to the internal standard tetramethylsilane used in 1H NMR)
High performance liquid chromatography:
HPLC
Infrared spectrophotometry: IR
Length: nm, μm, mm, cm, m
Literature: lit.
Mass spectrometry: m/z [M]+ (molecular
ion, parent ion)
Melting points: uncorr. (uncorrected)
Molecular mass: Da (daltons), kDa
Molecular weight: Mr
Nuclear magnetic
resonance: 1H NMR, 13C NMR, Hz, δ
Numbers: e.g. 1, 10, 100, 1000, 10,000: per or -1
Optical rotatory dispersion: ORD
Paper
chromatography: PC
Precipitate: ppt.
Preparative thin-layer chromatography: prep. TLC
Radioactivity: dpm (disintegrations per
min), Ci (curie), sp. act (specific activity), Bq (1 becquerel = 1 nuclear transformation/sec)
Repetitive manipulations: once, twice, ×3, ×4, etc.
RRt (relative retention time), Rt (Kovat's retention index), ECL (equivalent chain length - term frequently
used in fatty acid work)
Saturated: satd.
Solution: soln.
Solvent mixtures including chromatographic solvents: abbreviate as
follows n-BuOH–HOAc–H2O (4:1:5)
Statistics: LSD (least significant difference), s.d. (standard deviation), s.e. (standard
error)
Temperature: (with centigrade), mp, mps, mmp, bp
Temperature: temp.
Thin-layer chromatography: TLC, Rf
Time: s, min,
h, day, week, month, year
Ultraviolet spectrophotometry: UV, A (absorbance, not OD - optical density)
Volume: l (litre), μl,
ml
Weight: wt, pg, ng, μg, mg, g, kg
Inorganics, e.g.
AlCl3 (aluminum chloride), BF3 (boron trifluoride), Cr-,
CO2, H2, HCl, HClO4 (perchloric acid), HNO3, H2O, H2O2, H2SO4, H3BO3 (boric acid), He, KHCO3 (potassium bicarbonate), KMnO4 (potassium
permanganate), KOH, K-Pi buffer (potassium phosphate buffer), LiAlH4 (lithium aluminium hydride), Mg2+, MgCl2, N2, NH3, (NH4)2SO4, Na+,
NaBH4 (sodium borohydride), NaCl, NaIO4 (sodium periodate), NaOH, Na2SO3 (sodium sulphite), Na2SO4 (sodium sulphate), Na2S2O3 (sodium
thiosulphate), O2, PPi (inorganic phosphate), SO, Tris (buffer).
Organics, e.g.
Ac2O (acetic anhydride), n-BuOH (butanol),
C6H6 (benzene), CCl4 (carbon tetrachloride), CH2Cl2 (methylene chloride), CHCl3 (chloroform), CH2N2 (diazo-methane), CM (carboxymethyl),
DEAE (diethylaminoethyl), DMF (dimethylformamide), DMSO (dimethyl sulphoxide), EDTA (ethylene-diaminetetra-acetic acid), Et2O (diethyl
ether), EtOAc (ethyl acetate), EtOH (ethanol), HCO2H (formic acid), HOAc (acetic acid), iso-PrOH (iso-propanol), Me2CO (acetone), MeCOEt
(methyl ethyl ketone), MeOH (methanol), NaOAc (sodium acetate), NaOMe (sodium methoxide), petrol (not light-petroleum or petroleum ether),
PhOH (phenol), PrOH (propanol), PVP (polyvinylpyrrolidone), TCA (trichloroacetic acid), TFA (trifluoroacetic acid), THF (tetrahydrofuran).
1H NMR solvents and standards: CDCl3 (deuterochloroform), D2O, DMSO-d6 [deuterodimethylsulphoxide, not (CD3)2SO], pyridine-d5 (deuteropyridine),
TMS (tetramethylsilane).
For further terms used in biochemistry and molecular biology the authors should see the websites of the nomenclature
committees (
http://www.chem.qmul.ac.uk/iubmb/).
Acknowledgements
Collate
acknowledgements in a separate section at the end of the article before the references and do not, therefore, include them on the title
page, as a footnote to the title or otherwise. List here those individuals who provided help during the research (e.g., providing language
help, writing assistance or proof reading the article, etc.).
Nomenclature and Units
Chemical
nomenclature, abbreviations and symbols must follow IUPAC rules. Whenever possible, avoid coining new trivial names; every effort should
be made to modify an existing name. For example, when a new compound is described, it should be given a full systematic name according
to IUPAC nomenclature and this should be cited in the Abstract or in the Experimental section. Isotopically-labeled substances should
be written with the correct chemical name of the compound. The symbol for the isotope should be placed in square brackets and should
precede that part of the name to which it refers, e.g. sodium [14C]formate.
Optical rotation, optical rotary dispersion, circular dichroism:
Data should be presented in the established form, e.g.
[α] Value (+ or –) in ° (
c {wt of compound in 100 ml
of solvent}, solvent used)
temp.D
Example: [α] +32° (
c 0.3210, EtOH).
23D
ORD curves usually
described as a series of values based on [α] or [θ] (molecular rotation) at various wavelengths.
CD values may be expressed
as molecular ellipticity values [θ], e.g., [θ]
256 + 21 780, [θ]
307 – 16 113 or as differential
dichroic absorption, e.g. δε
253 – 1.0 (MeOH;
c 0.164).
Ultraviolet–visible spectra: ε
values are given as log values in parentheses, e.g. λ nm (log ε): 203 (4.7), etc. EtOHmax
Infrared spectra: Data should be
presented in the established form, e.g. ν cm
–1: 1740, etc. 3CHCImax
Absorption should be expressed only in wave-numbers
and structural assignments should be indicated when possible in parentheses after the relevant wave-number, e.g. 1740 (>C=O), etc. The
following abbreviations should be used if the intensity of absorption bands are included: w - weak intensity, m - medium intensity, v
- variable intensity, s - strong intensity, vs - very strong intensity.
NMR spectral data should be presented in full as Supplementary
Information for all newly identified compounds. If the data are already published elsewhere then relevant references should be quoted.
Data must be specified as 1H NMR or 13C NMR and should indicate the frequency of the instrument, the solvent used and the internal standard.
Chemical shifts should be quoted in δ units relative to TMS with indication of whether the signal is a singlet s, doublet d, doublet
of doublets dd, triplet t, multiplet m, etc. 13C NMR spectral data should specify the carbon concerned, using the recommended IUPAC numbering
(e.g. C-l, C-2), and should be given to one decimal place. 1H NMR spectral data should indicate the number of hydrogens involved and
their position of attachment based on the numbering of the carbon atoms, preferably according to IUPAC rules. For example, 13C NMR spectral
data (25.15 MHz, CDCl3): δ 30.1 (t, C-5), 74.1 (d, C-6), 121.7 (d, C-3), 144.2 (s, C-4), etc. 1H NMR spectral data (100 MHz, CDCl3): δ 0.68 (3H, s, H-18), 0.88 (6H, d, J=6 Hz, H-26 and H-27), 0.90 (3H, d, J=5 Hz, H-21), 4.34 (1H, q, J
6α,7α=4.5
Hz, J
6α,7β=2Hz, H-6), 4.21 (1H, m, W
1/2 18 Hz, H-3α).
Mass
spectral data should be presented in full as Supplementary Information for all newly identified compounds. If the data are already published
elsewhere then relevant references should be quoted. Presentation of mass spectral data should in general follow the recommendations
given in Int. J. Mass Spectrom. Ion Processes, 142, 211-240 (1995), and must indicate the method used (EIMS, CIMS, GC-MS, etc.) and the
ionizing energy. The data should give only diagnostically important ions, the character of the fragmentation ions in relation to the
molecular ion and the intensity relative to the major ion. For example-EIMS (probe) 70 eV, m/z (rel. int.): 386 [M]+ (36), 368 [M - H2O]+
(100), 353 [M - H2O - Me] + (23), 275 [M - 111] + (35), etc. CIMS (iso-butane, probe), 200 eV, m/z (rel. int.): 387 [M + H] + (100),
369 [(M + H) - H2O] + (23), etc. High-resolution spectra can be given in more detail if necessary for [M] + and the more important fragment
ions.
X-ray crystallography.
Only essential data (e.g. a three-dimensional structural drawing with bond distances) should be included
in manuscripts. A complete list of data in CIF (Crystallographic Information File) format should be prepared separately and deposited
with the Cambridge Crystallographic Data Centre (see
http://www.ccdc.cam.ac.uk for further information) before the paper
is submitted. A footnote indicating this fact is to be included in the manuscript. "CCDC...contains the supplementary crystallographic
data for this paper. These data can be obtained free of charge via
http://www.ccdc.cam.ac.uk/conts/retrieving.html (or from
the CCDC, 12 Union Road, Cambridge CB2 1EZ, UK; fax: +44 1223 336033; e-mail:
deposit@ccdc.cam.ac.uk)". Crystal structures
of proteins should be submitted to the Protein Data Bank (see
http://www.rcsb.org/pdb; e-mail:
info@rcsb.org).
Please submit a copy of the CIF data when you submit your manuscript.
Elemental
analysis results for compounds which have been adequately described in the literature must be given in the form: (Found: C, 62.9; H,
5.4. Calc. for C13H13O4N: C, 63.2; H, 5.3%.) New compounds must be indicated by giving analytical results in the form: (Found: C, 62.9;
H, 5.4. C13H13O4N requires: C, 63.2; H, 5.3%.)
Thin-layer chromatography
(a) For analytical TLC, dimensions of the plates can
be deleted if layer thickness is 0.25 mm.
(b) Abbreviate common adsorbents: (but use silica gel, not SiO2 as this does not describe
the material accurately), Al2O3 (alumina).
(c) Preparative forms of the technique should include details of (i) layer thickness (preparative
TLC only), (ii) amount of sample applied to the layer, (iii) method of detection used to locate the bands and (iv) the solvent used to
recover the compounds from the adsorbent after development.
(d) Special forms of TLC on impregnated adsorbents can be abbreviated,
e.g. AgNO3-silica gel (1:9), by wt can be assumed.
Gas chromatography
(a) Detector used should be specified, e.g. dual FID, EC,
etc.
(b) Carrier gas and flow rate should be given, e.g. N2 at 30 ml min-1.
(c) Operating conditions, such as injector and detector
heater temperatures etc., should be included.
(d) Packed columns, e.g. 6 m x 3 mm (i.d. measurement only) packed with 1% SE-30 (support
material and mesh size can be omitted unless unusual).
(e) Capillary columns should be specified, e.g. WCOT (wall coated open tubular),
SCOT (support coated open tubular). The split ratio used in the injection system and the injection volume for the sample should also
be included.
High performance liquid chromatography
(a) Solvent or solvent gradients used together with flow rate should be given.
(b) Column dimensions (length x i.d. only) and packing used.
(c) Method of detection employed, e.g. UV or refractive index.
Biochemical
conventions
Unless a common biochemical term (e.g. ATP, NADH), biochemicals that are abbreviated should be spelled out in full (in
brackets) immediately following their first usage in the text.
Enzyme names
are typically not abbreviated, unless there are accepted abbreviations, such as ATPase. Where possible, E.C. numbers should be used for
enzymes, and the recommendations of the Nomenclature Committee of the International Union of Biochemistry and Molecular Biology (IUBMB)
should be used (see below).
Enzyme characterization
(a) Enzyme activity is expressed in units of katals (symbol kat), the conversion
of one mol of substrate per sec. It should be made clear that the measurements were made under specified optimum conditions and were
not seriously affected by losses during extraction and analysis.
(b) pH optima should be given together with pH values for half maximal
activity.
(c) Kinetic parameters should be expressed as Vmax, Km etc.
(d) Enzyme inhibitors-effectiveness should be expressed
as Ki or concentration for half-maximal activity.
(e) Optimal temperature of enzymes should not be given. This should be expressed
in terms of "Energy of Activation" and "Energy of Activation for Denaturation".
(f) Enzyme nomenclature is now given in "Enzyme Nomenclature,
Recommendations", Academic Press (1992) (
http://www.chem.qmul.ac.uk/iubmb).
(g) Labeling of proteins and nucleic acids-use
of labelled precursors in assessing the rate of synthesis of macromolecules must be validated by evidence of real, direct incorporation.
The possibility of occlusion or adsorption of isotopic material should be noted and it should be shown that the labeled precursor is
incorporated without prior catabolism.
Protein and nucleotide sequences
The Experimental must contain explicit documentation of
the ends of nucleotide probes used in the study if previously unpublished, or by appropriate reference to published nucleotide numbers
and/or restriction map. In manuscripts to be published in Phytochemistry, any new protein and/or nucleotide sequence must have been submitted
to EMBL, GenBank™ or DNA Data Bank of Japan databases, with designated accession number(s) obtained prior to paper acceptance by
the Regional Editor. The Author(s) must ensure access to this database information by timely release of data prior to publication, as
well as providing necessary documentation to those already in the databases.
Nucleotide
sequence data can be submitted either electronically (e-mail) or in computer-readable format, GenBank™, EMBL and the DNA Data Bank
of Japan addresses are:
GenBank Submissions, National Center for Biotechnology Information, Building 38A, Room 8N-803, Bethesda,
MD 20894. Tel.: +1 301 496-2475; e-mail (submissions):
gb-sub@ncbi.nlm.nih.gov; e-mail (information):
info@ncbi.nlm.nih.gov
EMBL Nucleotide Sequence Submissions, European Bioinformatics Institute, Hinxton Hall, Hinxton, Cambridge CB10 1SD, UK. Tel.: +44 (0)
1223-494401; fax: +44 (0) 1223-494472; e-mail:
datasubs@ebi.ac.uk; world wide web:
http://www.ebi.ac.uk/embl
DNA Data Bank of Japan, Center for Information Biology, National Institute of Genetics, Mishima, Shizuuoka 411-8540, Japan. Tel.: (+81)
559-81-6853; fax: (+81) 559-81-6849; e-mail:
ddbjsub@ddbj.nig.ac.jp (for data submissions); world wide web:
http://www.ddbj.nig.ac.jp.
Contributors must obtain the designated accession number, which will be incorporated into the paper, prior to printing.
Only novel
DNA sequences will be published. Sequences that show close similarity to known coding or other sequences such as promoters will not be
published and will be cited by accession number. Translated protein sequence information should be published as alignments against other
gene family members. Papers containing such information about genes already known in other species should have sufficient novelty and
biological significance. Sequence only papers or papers which duplicate work in another species will not be published.
Genes known
by three letter names should be written in italics. The corresponding cognate protein should be written in capital, non-italic text.
Accession numbers
Accession numbers are unique identifiers in bioinformatics allocated to nucleotide and
protein sequences to allow tracking of different versions of that sequence record and the associated sequence in a data repository [e.g.,
databases at the National Center for Biotechnical Information (NCBI) at the National Library of Medicine ('GenBank') and the Worldwide
Protein Data Bank]. There are different types of accession numbers in use based on the type of sequence cited, each of which uses a different
coding. Authors should explicitly mention the
type of accession number together with the actual number, bearing in mind that
an error in a letter or number can result in a dead link in the online version of the article. Please use the following format: accession
number type ID: xxxx (e.g., MMDB ID: 12345; PDB ID: 1TUP). Note that in the final version of the
electronic copy, accession
numbers will be linked to the appropriate database, enabling readers to go directly to that source from the article.
Electronic artwork
General points
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Formats
Regardless of the application used, when
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Figure
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Tables
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References
Citation in text
Please ensure that every reference cited in the text is also present in the reference list
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Reference style
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List:
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the same author(s) in the same year must be identified by the letters "a", "b", "c", etc., placed after the year of publication.
Examples:
Reference to a journal publication:
Van der Geer, J., Hanraads, J.A.J., Lupton, R.A., 2000. The art of writing a scientific article.
J. Sci. Commun. 163, 51-59.
Reference to a book:
Strunk Jr., W., White, E.B., 1979. The Elements of Style, third ed. Macmillan,
New York.
Reference to a chapter in an edited book:
Mettam, G.R., Adams, L.B., 1999. How to prepare an electronic version of
your article, in: Jones, B.S., Smith , R.Z. (Eds.), Introduction to the Electronic Age. E-Publishing Inc., New York, pp. 281-304.
Journal Abbreviations Source
Journal titles should be abbreviated (e.g. Carbohydr. Res.) following the Chemical
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Submission
checklist
It is hoped that this list will be useful during the final checking of an article prior to sending it to the journal's
Editor for review. Please consult this Guide for Authors for further details of any item.
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present:
One Author designated as corresponding Author:
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Further considerations
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•
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Additional Information
Is
the subject matter really appropriate to
Phytochemistry–
Is the work described both new and significant?
Have you supplied
a
Graphical Abstract–
Is the
Title both
short and
informative–
Does the
Abstract
fully represent your scientific contribution? Is it self-contained? (Avoid formulae, numbers and abbreviations given in the text.)
Have
you avoided repeating yourself? Have you avoided presenting the same data more than once? Can you really justify writing separate 'Results'
and 'Discussion' sections?
Have you checked plant names? Are you sure of the identity of the plants examined? Have you indicated
the
part of the plant you extracted? Have you deposited a voucher specimen and given access information?
Have you remembered
to add the accepted IUPAC systematic names for new plant products?
Have you used all the suggested abbreviations in the Experimental?
Have you remembered to enclose with (or cite in) your manuscript and other relevant papers (e.g. reprint of previous paper in a series,
any manuscripts of papers in press referred to in the paper, etc.)?
Is your manuscript double-spaced throughout with adequate margins
and consists of one file containing all your text, figures and tables with a file name extension, plus separate original graphic files
ready for online submission?
AFTER ACCEPTANCE
Use of the Digital Object Identifier
The Digital Object Identifier (DOI) may be used to cite and link to
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the initial electronic publication. The assigned DOI never changes. Therefore, it is an ideal medium for citing a document, particularly
'Articles in press' because they have not yet received their full bibliographic information. The correct format for citing a DOI is shown
as follows (example taken from a document in the journal
Physics Letters B):
doi:10.1016/j.physletb.2003.10.071
When
you use the DOI to create URL hyperlinks to documents on the web, they are guaranteed never to change.
Proofs
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