Computational Approaches for Understanding Dynamical Systems: Protein Folding and Assembly - 1st Edition - ISBN: 9780128211359

Computational Approaches for Understanding Dynamical Systems: Protein Folding and Assembly, Volume 170

1st Edition

Editors: David Teplow
Serial Volume Editors: Birgit Strodel Bogdan Barz
Hardcover ISBN: 9780128211359
Imprint: Academic Press
Published Date: 1st March 2020
Page Count: 300
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Table of Contents

1. Pairwise-Additive and Polarizable Atomistic Force Fields for Molecular Dynamics Simulations of Proteins
Justin Lemkul
2. Scale-consistent approach to the derivation of coarse-grained force fields for simulating structure, dynamics, and thermodynamics of biopolymers
Adam Liwo
3. Monte Carlo methods in protein folding and assembly
Sandipan Mohanty
4. Enhanced sampling and free energy methods
Qinghua Liao
5. Markov models of molecular simulations of protein folding, protein-protein interactions, and aggregation
Nicolae-viorel Buchete
6. Molecular dynamics simulations with experimental restraints
Kresten Lindorff-Larsen
7. Protein folding simulations
Ivan Coluzza
8. Thermal stability of proteins
Fabio Sterpone
9. Aggregation of short disease-related peptides
Philippe Derreumaux
10. Dichotomy between universality and specificity of amyloid β-protein oligomer formation: Molecular dynamics perspective
Brigita Urbanc
11. Computational studies of protein aggregation mediated by amyloid: Fibril elongation and secondary nucleation
Wei Han


Description

Computational Approaches for Understanding Dynamical Systems: Protein Folding and Assembly, Volume 170 in the Progress in Molecular Biology and Translational Science series, provides the most topical, informative and exciting monographs available on a wide variety of research topics. The series includes in-depth knowledge on the molecular biological aspects of organismal physiology, with this release including chapters on Pairwise-Additive and Polarizable Atomistic Force Fields for Molecular Dynamics Simulations of Proteins, Scale-consistent approach to the derivation of coarse-grained force fields for simulating structure, dynamics, and thermodynamics of biopolymers, Enhanced sampling and free energy methods and much more.

Key Features

  • Includes comprehensive coverage of molecular biology
  • Presents ample use of tables, diagrams, schemata and color figures to enhance the reader's ability to rapidly grasp the information provided
  • Contains contributions from renowned experts in the field

Readership

Scientists working actively in molecular biology and translational science, including those at levels ranging from graduate student to senior investigator. Volumes also are appropriate for new investigators to a field who wish to familiarize themselves with the latest work


Details

No. of pages:
300
Language:
English
Copyright:
© Academic Press 2020
Published:
1st March 2020
Imprint:
Academic Press
Hardcover ISBN:
9780128211359

Ratings and Reviews


About the Editors

David Teplow

David Teplow Editor

Professor Teplow is a member of the Department of Neurology, David Geffen School of Medicine at UCLA; Director, UCLA Biopolymer Laboratory; and a member of the faculties of the Molecular Biology Institute, Brain Research Institute, Chemistry-Biology Interface Training Program, and various neuroscience graduate programs. Professor Teplow received degrees in Biochemistry, and in Bacteriology & Immunology, from UC Berkeley; a Ph.D. from the University of Washington, Seattle; and postdoctoral training at the California Institute of Technology, Pasadena, CA. From 1991-2005, Professor Teplow was a member of the faculty of the Department of Neurology, Harvard Medical School, Boston. Professor Teplow has published >200 peer-reviewed articles, including ~150 original articles and ~50 reviews, book chapters, and commentaries. Professor Teplow was a founding editor of the Journal of Molecular Neuroscience and Current Chemical Biology. He currently is Associate Editor-in-Chief of the American Journal of Neurodegenerative Disease. Professor Teplow is a member of numerous national and international scientific advisory and editorial boards.

Affiliations and Expertise

David Geffen School of Medicine, UCLA, Los Angeles, CA, USA

About the Serial Volume Editors

Birgit Strodel Serial Volume Editor

Bogdan Barz Serial Volume Editor