Bioinformatics, Volume 6

1st Edition

Editors: Dilip K Arora Randy Berka Gautam Singh
Hardcover ISBN: 9780444518071
eBook ISBN: 9780080463704
Imprint: Elsevier Science
Published Date: 15th August 2006
Page Count: 350
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Table of Contents

Editorial Board for Volume 6 Contents Contributors Preface

SECTION A: PRINCIPLES Experimental Design and Analysis of Microarrary Data Method for Protein Homology Modelling Phylogenetic Network Construction Approaches Issues in Comparative Fungal Genomics

SECTION B: TOOLS Fungal Genomic Annotation Bioinformatics Packages for Sequence Analysis A Survey of Computational Methods Used in Microarray Data Interpretation Computational Methods in Genome Research Creating Fungal Pathway/Genome Databases Using Pathway Tools Comparative Genomic Analysis of Glycoylation Pathways in Yeast, Plants and Higher Eukaryotes SECTION C: APPLICATIONS

LARaLINK 2.0: Data Mining for Clinical Cytogenetics Sequence-Based Analysis of Fungal Secretomes Using Web Agents for Data Mining of Fungal Genomes Searching Biological Databases Using Biolinguistic Methods Keyword Index


The advances in genomic technologies, such as microarrays and high throughput sequencing, have expanded the realm of possibilities for capturing data and analyzing it using automated computer driven bioinformatics tools. With the completion of the sequencing of genomes of human and several model organisms, a quest for scientific discoveries being fueled by integrative and multidimensional techniques in mathematics and computational sciences. In this volume, leading researchers and experts have provided an overview of significant concepts from biological, mathematical, and computational perspectives. It provides a high level view of fungal genomic data integration and annotation, classification of proteins and identification of vaccine targets, identification of secretome or secreted proteins in fungal genomes, as well as tools for analyzing microarray expression profiles.

Key Features

  • Provides a survey of theoretical underpinnings on the technological tools and applications
  • Discusses the tools utilized for the annotation of fungal genomes and addresses issues related to automated annotation generation in a high throughput biotechnology environment
  • describing the applications of the concepts and methodologies presented throughout the book


Physical and computational scientists, life scientists, and all those with mathematical, and computer backgrounds


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© Elsevier Science 2006
Elsevier Science
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About the Editors

Dilip K Arora Editor

Affiliations and Expertise

Department of Botany, Banaras Hindu University, Varanasi, India

Randy Berka Editor

Affiliations and Expertise

Novozymes Biotech, Inc., Davis, CA, U.S.A.

Gautam Singh Editor

Affiliations and Expertise

Center for Bioinformatics, Department of Computer Science & Engineering, Oakland University, Rochester, MI, U.S.A.