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ENVIRONMENTAL MICROBIOLOGY
Environmental Microbiology
A Laboratory Manual
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Second Edition

By
Ian Pepper, - University of Birmingham, B.Sc. in Chemistry, 1970 - Ohio State University, M.S. in Soil Biochemistry, 1972 - Ohio State University, Ph.D. in SOil Microbiology, 1975, University of Arizona, Tucson, USA
Charles Gerba, - June 1969: Arizona State University, Tempe, Arizona, B.S., Microbiology - January 1973: University of Miami, Coral Gables, Florida, Ph.D. Microbiology, University of Arizona, Tucson, USA

Description
Environmental Microbiology: A Laboratory Manual is designed to meet the diverse requirements of upper division and graduate-level laboratory sessions in environmental microbiology. The experiments introduce students to the activities of various organisms and the analyses used to study them. The book is organized into three thematic sections: Soil Microbiology, Water Microbiology, and Environmental Biotechnology. The first section includes experiments on the soil as a habitat for microorganisms, and introduces the main types of soil microorganisms, how they interact with the soil, and the techniques used in their analysis. Experiments in the second section cover assays of microbial pathogens--bacteria, viruses, and protozoan parasites--used in food and water quality control as well as an exercise in applied bioremediation of contaminants in water. The final section on biotechnology includes applications of the polymerase chain reaction (PCR) for the detection of bacteria and the use of enrichment cultures and a computer-based, physiological test bank to isolate and identify a bacterium useful in bioremediation. Designed for maximum versatility and ease of use for both the student and instructor, each experiment is self-contained and includes theoretical, practical, and pedagogical material.

Audience
Professional microbiologists working with soil and water; upper-division undergraduate and graduate students studying environmental microbiology.

Contents


Preface


Basic Protocols
Experiment 1 - Dilution and Plating of Bacteria and Growth Curves Experiment 2 - Soil Moisture Content Determination

Examination of Soil Microorganisms via Microscopic and Cultural Assays
Experiment 3 - Contact Slide Assay Experiment 4 - Filamentous Fungi Experiment 5 - Bacteria and Actinomycetes Experiment 6 - Algae: Enumeration by MPN

Microbial Transformations and Response to Contaminants
Experiment 7 - Oxidation of Sulfur in SoilExperiment 8 - Dehydrogenase Activity of Soils Experiment 9 - Nitrification and Denitrification Experiment 10 - Enrichment and Isolation of Bacteria that Degrade 2, 4-dichlorophenoxyacetic acid Experiment 11 - Adaptation of Soil Bacteria to Metals Experiment 12 - Biodegradation of Phenol Compounds Experiment 13 - Assimilable Organic Matter Experiment 14 - Biochemical Oxygen Demand

Water Microbiology
Experiment 15 - Membrane Filter Technique Experiment 16 - Bacteriological Examination of Water: the Coliform MPN Test Experiment 17 - Detection of Bacteriophages Experiment 18 - Film Medium for the Detection of Coliforms in Water, Food, and on Surfaces Experiment 19 - Defined Substrate Technology for the Detection of Coliforms and Fecal Coliforms

Advanced Topics
Experiment 20 - Detection of Enteric Viruses in Water Experiment 21 - Detection of Waterborne Parasites Experiment 22 - Kinetics of Disinfection Experiment 23 - Aerobiology: Sampling of Airborne Microorganisms Experiment 24 - Detection and Identification of Bacteria via PCR and Subsequent BLAST Analysis of Amplified Sequences

Appendix 1: Preparation of Media and Stains for Each Experiment


Appendix 2: Glossary


Bibliographic details
Paperback, 232 pages, publication date: DEC-2004
ISBN-13: 978-0-12-550656-4
ISBN-10: 0-12-550656-2
Imprint: ACADEMIC PRESS

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EUR 38.95
GBP 33
USD 48.95
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Last update: 5 Sep 2009
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